• ⸻ 2026-03-02

Interactive visualization of multimodal and spatial data with Vitessce

• Mark Keller, Altana Namsaraeva, Alex Wolf, Chaichontat Sriworarat, Sunny Sun

The open-source tool Vitessce and Lamin now work together to manage & visualize multimodal and spatial single-cell data. It’s simple: define a Vitessce config in code, save it as an artifact, and share the interactive visualization along with your datasets on LaminHub.

• ⸻ 2024-04-03

MappedCollection: Weighted random sampling from large collections of scRNA-seq datasets

• Sergei Rybakov, Felix Fischer, Maciek Wiatrak, Ilan Gold, Yanay Rosen, Sunny Sun, Chaichontat Sriworarat, Fabian Theis, Jeremie Kalfon, Alex Wolf

A few labs and companies now train models on large-scale scRNA-seq count matrices and related data modalities. But unlike for many other data types, there isn’t yet a playbook for data scales that don’t fit into memory.